PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma136g00350.1
Common NameZOSMA_136G00350
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 92aa    MW: 10301.7 Da    PI: 8.5662
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma136g00350.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.22.6e-0719581554
                      HHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS
               HLH 15 riNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54
                      +i + +++LrellP+    ++s++ +s + +L++++ +I sL
  Zosma136g00350.1 19 QISDLLFRLRELLPEvH--GRSGRrVSASKVLQETCTHIMSL 58
                      899************66..555555**************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.76458IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-8477IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.8E-51858IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.2E-71876IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MSSRRRQSTN NGSRITDEQI SDLLFRLREL LPEVHGRSGR RVSASKVLQE TCTHIMSLHR  60
EVDDLSERLL ELLATTETSS AQAAIIRSLL L*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009389574.12e-34PREDICTED: transcription factor ILI6-like
SwissprotB8APB51e-31ILI6_ORYSI; Transcription factor ILI6
SwissprotQ0DUR21e-31ILI6_ORYSJ; Transcription factor ILI6
TrEMBLA0A0K9Q0Q07e-58A0A0K9Q0Q0_Z
STRINGGSMUA_Achr2P07410_0017e-34(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26753378
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.13e-24bHLH family protein